Journal of Proteome Research

Aims & Scope

Journal of Proteome Research publishes content encompassing all aspects of global protein analysis and function, including the dynamic aspects of genomics, spatio-temporal proteomics, metabonomics and metabolomics, clinical and agricultural proteomics, as well as advances in methodology including bioinformatics.

The theme and emphasis is on a multidisciplinary approach to the life sciences through the synergy between the different types of "omics".

View Aims & Scope

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Metrics & Ranking

Impact Factor

Year	Value
2025	3.6
2024	3.80

SJR (SCImago Journal Rank)

Year	Value
2024	1.139

Quartile

Year	Value
2024	Q1

h-index

Year	Value
2024	191

Journal Rank

Year	Value
2024	3898

Journal Citation Indicator

Year	Value
2024	4420

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Abstracting & Indexing

Journal is indexed in leading academic databases, ensuring global visibility and accessibility of our peer-reviewed research.

• Scopus
• Google Scholar
• Web of Science

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Subjects & Keywords

Journal’s research areas, covering key disciplines and specialized sub-topics in Biochemistry, Genetics and Molecular Biology and Chemistry, designed to support cutting-edge academic discovery.

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Most Cited Articles

The Most Cited Articles section features the journal's most impactful research, based on citation counts. These articles have been referenced frequently by other researchers, indicating their significant contribution to their respective fields.

• Andromeda: A Peptide Search Engine Integrated into the MaxQuant Environment

  Citation: 5185

  Authors: Jürgen, Nadin, Annette, Richard A., Jesper V., Matthias

• Cytoscape StringApp: Network Analysis and Visualization of Proteomics Data

  Citation: 1777

  Authors: Nadezhda T., John H., Jan, Lars J.

• Evaluation of Multidimensional Chromatography Coupled with Tandem Mass Spectrometry (LC/LC−MS/MS) for Large-Scale Protein Analysis:  The Yeast Proteome

  Citation: 1481

  Authors: Junmin, Joshua E., Carson C., Larry J., Steven P.

• Analysis of the Human Adult Urinary Metabolome Variations with Age, Body Mass Index, and Gender by Implementing a Comprehensive Workflow for Univariate and OPLS Statistical Analyses

  Citation: 1329

  Authors: Etienne A., Aurélie, Ying, Eric, Christophe

• Proteomic Analysis of the Mode of Antibacterial Action of Silver Nanoparticles

  Citation: 1287

  Authors: Chun-Nam, Chi-Ming, Rong, Qing-Yu, Wing-Yiu, Hongzhe, Paul Kwong-Hang, Jen-Fu, Chi-Ming

• DTASelect and Contrast:  Tools for Assembling and Comparing Protein Identifications from Shotgun Proteomics

  Citation: 1248

  Authors: David L., W. Hayes, John R.

• Open Mass Spectrometry Search Algorithm

  Citation: 1217

  Authors: Lewis Y., Sanford P., Jeffrey A., Lukas, Ming, Dawn M., Xiaoyu, Wenyao, Stephen H.

• Chemometrics in Metabonomics

  Citation: 1085

  Authors: Johan, Elaine, Torbjörn

• GlycoWorkbench: A Tool for the Computer-Assisted Annotation of Mass Spectra of Glycans

  Citation: 966

  Authors: Alessio, Kai, Hildegard, Rudolf, Anne, Stuart M.

• Statistical Analysis of Membrane Proteome Expression Changes in <i>Saccharomyces </i><i>c</i><i>erevisiae</i>

  Citation: 966

  Authors: Boris, Amber L., Mihaela E., Michael K., Laurence, Michael P.

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