Functional and Integrative Genomics

Aims & Scope

Functional & Integrative Genomics is devoted to large-scale studies of genomes and their functions, including systems analyses of biological processes.

The journal will provide the research community an integrated platform where researchers can share, review and discuss their findings on important biological questions that will ultimately enable us to answer the fundamental question: How do genomes work?

Topics covered include but are not limited to: Whole genome analyses of model and complex organisms Genomics (Structural, comparative, integrative) and bioinformatics tools Proteomics and Metabolomics (integrated with function) Metagenomics Ionomics Large-scale/high-throughput analysis of biological systems Emphasis will be placed on manuscripts addressing important biological problems using large-scale systems and approaches.

Studies on bacterial, fungal, protista, plant and animal genomes are welcome.

Papers describing new genomics tools and databases will also be considered for publication.

View Aims & Scope

---

Metrics & Ranking

Impact Factor

Year	Value
2025	3.1
2024	3.90

Journal Rank

Year	Value
2024	7816

Journal Citation Indicator

Year	Value
2024	1516

SJR (SCImago Journal Rank)

Year	Value
2024	0.721

Quartile

Year	Value
2024	Q2

h-index

Year	Value
2024	89

---

---

Abstracting & Indexing

Journal is indexed in leading academic databases, ensuring global visibility and accessibility of our peer-reviewed research.

• Scopus
• Google Scholar
• Web of Science
• Embase

---

Subjects & Keywords

Journal’s research areas, covering key disciplines and specialized sub-topics in Biochemistry, Genetics and Molecular Biology and Medicine, designed to support cutting-edge academic discovery.

---

Most Cited Articles

The Most Cited Articles section features the journal's most impactful research, based on citation counts. These articles have been referenced frequently by other researchers, indicating their significant contribution to their respective fields.

• Insights from 20 years of bacterial genome sequencing

  Citation: 607

  Authors: Miriam, Loren, Se-Ran, Intawat, Michael R., Tae-Hyuk, Tatiana, Ole, Guruprased, Trudy, Suresh, David W.

• Water and salinity stress in grapevines: early and late changes in transcript and metabolite profiles

  Citation: 458

  Authors: Grant R., Ali, Jerome, Richard L., Elizabeth A. R., Marlene C., Delphine, Justin, Jason, Craig, David, Karen A., David A., John C.

• Microsatellite-based deletion bin system for the establishment of genetic-physical map relationships in wheat ( Triticum aestivum L.)

  Citation: 449

  Authors: Pierre, Sukhwinder, Thierry, Gina L., Georges, Lili, Bikram S., Philippe, Alain, Michel

• Monitoring the expression pattern of around 7,000 Arabidopsis genes under ABA treatments using a full-length cDNA microarray

  Citation: 373

  Authors: Motoaki, Junko, Mari, Miki, Tokihiko, Taishi, Asako, Maiko, Akiko, Tetsuya, Masakazu, Kenji, Kazuko, Piero, Jun, Yoshihide, Kazuo

• The genomics of yeast responses to environmental stress and starvation

  Citation: 350

  Authors: Audrey P., Margaret

• RefFinder: a web-based tool for comprehensively analyzing and identifying reference genes

  Citation: 313

  Authors: Fuliang, Jianyu, Baohong

• CRISPR/Cas9 genome editing in wheat

  Citation: 302

  Authors: Dongjin, Burcu, Hikmet

• Structure and expression analysis of early auxin-responsive Aux/IAA gene family in rice (Oryza sativa)

  Citation: 271

  Authors: Mukesh, Navneet, Rohini, Jitendra K., Akhilesh K., Jitendra P.

• Auxin-related gene families in abiotic stress response in Sorghum bicolor

  Citation: 257

  Authors: SuiKang, YouHuang, ChenJia, YunRong, SaiNa, DeAn, Tom J., Ming, YanHua

• Plant miRNAs: biogenesis, organization and origins

  Citation: 239

  Authors: Hikmet, B. Ani

---